jfsbndr
I don't believe that a miss by a preceeding runner affects the status of following runners, unless there are two outs.
There happens to be a caseplay in NFHS which closely matches the scenario you mention. From the casebook:
"8.2.1 SITUATION B: With R1 on second base, R2 on first base and no outs, B3 doubles. Both runners cross home plate, but R1 fails to touch third and (a) R1 gets back to third before ball arrives at third or (b) after all play has ended, the defensive properly appeals the missed base by R1 and the umpire calls him out for failing to touch third base. Does run by R2 count? RULING: In both (a) and (b), the run by R2 counts. In (a), if there is no defensive appeal, the play will stand. If the defense properly appeals, R1 will be called out as he cannot return to correct a missed base when a following runner has scored behind him."
I think scenario (b) shows that there must have been some other aspect of the play you mention which caused the runners to go back. I believe that all rule codes treat this situation in the same way.